PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000242185
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TCP
Protein Properties Length: 399aa    MW: 42547.1 Da    PI: 7.2646
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000242185genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.56.8e-4062173289
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                    ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++  + s +ss+s+ s++        
  MDP0000242185  62 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSSMSAPshylrtna 157
                    789******************************************************************999866777777664444444455444 PP

            TCP  89 ...............k 89 
                                    
  MDP0000242185 158 snyyfnsnnfgaaapT 173
                    4444444444433330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.1E-4166252IPR005333Transcription factor, TCP
PROSITE profilePS5136927.21868122IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MEADNGIRCR PNFPLQFLDK TNQVDDDPEP AAACSTVADP GSDPNRTGSS IQEEQPSNKK  60
PPPKRTSTKD RHTKVDGRGR RIRMPATCAA RVFQLTRELG HKSDGETIEW LLQQAEPSVI  120
AATGTGTIPA NFTSLNISLR SSGSSMSAPS HYLRTNASNY YFNSNNFGAA APTAQLGTAE  180
HSQRGRILFP GAGLMSSESS PPSSMLWNFN NSGNNNLSNN TMLEAKQELG DHHQAVTLDE  240
ASSMARKRIR PEQDLLSAST GSIPASQNTI PATFWMVANN NPSSSQGSIH HEHINSINPM  300
WTIPTVGNAG NMYRGPVAGG GHGLHFMNFA SPLAILPGQQ LGTGSITTTQ GAADGHLGML  360
AALNAYRPIL GGVAMESPVN GQHPHQGADE GHDRNTNAR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.113320.0bud| flower| fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008389481.10.0PREDICTED: transcription factor TCP15-like
SwissprotQ93Z006e-57TCP14_ARATH; Transcription factor TCP14
TrEMBLD9ZJD60.0D9ZJD6_MALDO; TCP domain class transcription factor
STRINGVIT_01s0026g02200.t011e-99(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.15e-51TCP family protein